flowcraft.templates.pipeline_status module

Purpose

This module is intended to collect pipeline run statistics (such as time, cpu, RAM for each tasks) into a report JSON

Expected input

  • trace_file : Trace file generated by nextflow

Code documentation

flowcraft.templates.pipeline_status.get_json_info(fields, header)[source]
Parameters:
fields
flowcraft.templates.pipeline_status.get_previous_stats(stats_path)[source]
Parameters:
workdir